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Advanced Imaging and Microscopy (AIM) Resource

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Photo of Harsh Vishwasrao
Acting Director

The Advanced Imaging & Microscopy Resource is a trans-NIH shared resource that houses, operates, disseminates, and improves non-commercial, prototype optical imaging systems developed at the NIH. AIM also provides support for advanced image processing, including applications of high-performance computing and artificial intelligence. The facilities at AIM are available for use by the entire NIH intramural research community.

While we welcome users with any size imaging project, AIM specializes in large, year-long (or longer) collaborative research efforts with NIH labs – providing sample preparation, microscope operation and development, and data processing/analysis as needed. We take care of the imaging and processing so that you can focus on the biology.

Microscope Description Spatial Resolution Speed
(frames/s)
Photodose Sample
Instant structured illumination microscope (ISIM) Fast super-resolution 140nm lateral
350nm axial
100 High Live or fixed. Small, thin samples like cells, organoids.
Dual-view Inverted Selective Plane Illumination Microscope (DISPIM) Fast, gentle, high resolution lightsheet for live samples 330nm isotropic 100 Low Live or fixed. Cells, up to medium size, transparent samples like organoids, C. elegans, zebrafish.
Cleared Tissue DISPIM Fast multi-view lightsheet for large cleared tissue samples 500nm isotropic 100 Low Fixed and cleared. Up to 5mm thick slabs of tissue, up to 2cm x 3cm lateral size.
Single Molecule TIRF/Inclined Illumination Microscope Variable inclination illumination single molecule imaging. Including STORM.  20 nm lateral
50-60 nm axial
100 High Live or fixed. Small, thin samples like cells.
Interferometric Photoactivated Localization Microscope (IPALM) Localization microscope with unprecedented lateral and axial resolution. 20 nm lateral
10nm axial
Not suitable for live cells High Fixed and specially mounted. Small and thin samples like cells, bacteria.

This table describes the spatial resolution, speed, and sample suitability of the five microscopes currently being operated by the Advanced Imaging and Microscopy (AIM) Resource.

 

 

Additional Lab Resource Information: 

Ni MLin ZChen ZXu ZZhang QZhao JLi WTang YCao ZLi BYao DCheng CHu YLiu XChen JLiu Z
Ecotoxicol Environ Saf
2024 Dec 10

Updegrove TBDelerue TAnantharaman VCho HChan CNipper TChoo-Wosoba HJenkins LMZhang LSu YShroff HChen JBewley CAAravind LRamamurthi KS
Sci Adv
2024 Oct 18

Wang ZMa WYang ZKiesewetter DOWu YLang LZhang GNakuchima SChen JSu YHan SWu LGJin AJHuang W
J Am Chem Soc
2024 Oct 23

Rehman AZhovmer ASato RMukouyama YSChen JRissone APuertollano RLiu JVishwasrao HDShroff HCombs CAXue H
Sci Rep
2024 Aug 06

Nguyen AZhao HMyagmarsuren DSrinivasan SWu DChen JPiszczek GSchuck P
Elife
2024 Jun 28

Rehman AZhovmer ASato RMukoyama YChen JRissone APuertollano RVishwasrao HShroff HCombs CAXue H
ArXiv
2024 Apr 06

Updegrove TBDelerue TAnantharaman VCho HChan CNipper TChoo-Wosoba HJenkins LMZhang LSu YShroff HChen JBewley CAAravind LRamamurthi KS
bioRxiv
2024 Mar 27



Chandler TGuo MSu YChen JWu YLiu JAgashe AFischer RSMehta SBKumar ABaskin TIJamouillé VLiu HSwaminathan VNain AOldenbourg RRiviére PShroff H
bioRxiv
2024 Mar 12

Chareyre SLi XAnjuwon-Foster BRUpdegrove TBClifford SBrogan APSu YZhang LChen JShroff HRamamurthi KS
Proc Natl Acad Sci U S A
2024 Mar 26

Strepay DOlszewski RTNixon SKorrapati SAdadey SGriffith AJSu YLiu JVishwasrao HGu SSaunders TRoux IHoa M
Sci Rep
2024 Feb 06

Nguyen AZhao HMyagmarsuren DSrinivasan SWu DChen JPiszczek GSchuck P
bioRxiv
2024 Mar 22

Lokwani RJosyula ANgo TBDeStefano SFertil DFaust MAdusei KMBhuiyan MLin AKarkanitsa MMaclean EFathi PSu YLiu JVishwasrao HDSadtler K
Nat Mater
2024 Jan

Sadhu RKHernandez-Padilla CEisenbach YEPenič SZhang LVishwasrao HDBehkam BKonstantopoulos KShroff HIglič APeles ENain ASGov NS
Nat Commun
2023 Dec 21

Strong CEZhang JCarrasco MKundu SBoutin MVishwasrao HDLiu JMedina AChen YCWilson KLee EMFerrer M
Commun Biol
2023 Nov 28

Strepay DOlszewski RTNixon SKorrapati SAdadey SGriffith AJSu YLiu JVishwasrao HGu SSaunders TRoux IHoa M
Res Sq
2023 Oct 04

Sadhu RKHernandez-Padilla CEisenbach YEPenič SZhang LVishwasrao HDBehkam BKonstantopoulos KShroff HIglič APeles ENain ASGov NS
Nat Commun
2023 Sep 12



Sun YBaechler SAZhang XKumar SFactor VMArakawa YChau CHOkamoto KParikh AWalker BSu YPChen JTing THuang SNBeck EItkin ZMcKnight CXie CRoper NNijhawan DFigg WDMeltzer PSYang JCThomas CJPommier Y
Nat Commun
2023 Jun 23

Scheich SChen JLiu JSchnütgen FEnssle JCCeribelli MThomas CJChoi JMorris VHsiao TNguyen HWang BBolomsky APhelan JDCorcoran SUrlaub HYoung RMHäupl BWright GWHuang DWJi YYu XXu WYang YZhao HMuppidi JPan KTOellerich TStaudt LM
Cancer Discov
2023 Aug 04

Zhao HWu DHassan SANguyen AChen JPiszczek GSchuck P
Sci Adv
2023 Apr 05

Ngo TBDeStefano SLiu JSu YShroff HVishwasrao HDSadtler K
J Biomed Mater Res A
2023 Jun

Li XWu YSu YRey-Suarez IMatthaeus CUpdegrove TBWei ZZhang LSasaki HLi YGuo MGiannini JPVishwasrao HDChen JLee SJShao LLiu HRamamurthi KSTaraska JWUpadhyaya ALa Riviere PShroff H
Nat Biotechnol
2023 Sep

Li YSu YGuo MHan XLiu JVishwasrao HDLi XChristensen RSengupta TMoyle MWRey-Suarez IChen JUpadhyaya AUsdin TBColón-Ramos DALiu HWu YShroff H
Nat Methods
2022 Nov

Hobson CMGuo MVishwasrao HDWu YShroff HChew TL
Nat Methods
2022 Dec

Zhao HNguyen AWu DLi YHassan SAChen JShroff HPiszczek GSchuck P
PNAS Nexus
2022 May


Tabler COWegman SJChen JShroff HAlhusaini NTilton JC
J Virol
2022 May 11

Zhao HNguyen AWu DLi YHassan SAChen JShroff HPiszczek GSchuck P
bioRxiv
2022 Feb 09

Wu YHan XSu YGlidewell MDaniels JSLiu JSengupta TRey-Suarez IFischer RPatel ACombs CSun JWu XChristensen RSmith CBao LSun YDuncan LHChen JPommier YShi YBMurphy ERoy SUpadhyaya AColón-Ramos DLa Riviere PShroff H
Nature
2021 Dec

Sun YChen JHuang SNSu YPWang WAgama KSaha SJenkins LMPascal JMPommier Y
Nat Commun
2021 Aug 18

Chen JSasaki HLai HSu YLiu JWu YZhovmer ACombs CARey-Suarez IChang HYHuang CCLi XGuo MNizambad SUpadhyaya ALee SJLucas LAGShroff H
Nat Methods
2021 Jun

Han XSu YWhite HO'Neill KMMorgan NYChristensen RPotarazu DVishwasrao HDXu SSun YHuang SYMoyle MWDai QPommier YGiniger EAlbrecht DRProbst RShroff H
Lab Chip
2021 Apr 20

Miyoshi TZhang QMiyake TWatanabe SOhnishi HChen JVishwasrao HDChakraborty OBelyantseva IAPerrin BJShroff HFriedman TBOmori KWatanabe N
Cell Rep
2021 Feb 02




Guo MLi YSu YLambert TNogare DDMoyle MWDuncan LHIkegami RSantella ARey-Suarez IGreen DBeiriger AChen JVishwasrao HGanesan SPrince VWaters JCAnnunziata CMHafner MMohler WAChitnis ABUpadhyaya AUsdin TBBao ZColón-Ramos DLa Riviere PLiu HWu YShroff H
Nat Biotechnol
2020 Nov

Chen JLiu YWu BNikolaitchik OAMohan PRChen JPathak VKHu WS
Proc Natl Acad Sci U S A
2020 Mar 17

Gryder BEPomella SSayers CWu XSSong YChiarella AMBagchi SChou HCSinniah RSWalton AWen XRota RHathaway NAZhao KChen JVakoc CRShern JFStanton BZKhan J
Nat Genet
2019 Dec

Peluso EAUpdegrove TBChen JShroff HRamamurthi KS
Proc Natl Acad Sci U S A
2019 Oct 22

Liu YGong CSDai YYang ZYu GLiu YZhang MLin LTang WZhou ZZhu GChen JJacobson OKiesewetter DOWang ZChen X
Biomaterials
2019 Oct

Mo TTDai HDu HZhang RYChai KPAn YChen JJWang JKChen ZJChen CZJiang XJTang RWang LPTan QTang PMiao XYMeng PZhang LBCheng SQPeng BTu BJHan TLXia YYBaker PN
Environ Toxicol
2019 Feb

Chen JJSong HCao WCWang YRWang JG
Huan Jing Ke Xue
2018 Aug 08

Guo MChandris PGiannini JPTrexler AJFischer RChen JVishwasrao HDRey-Suarez IWu YWu XWaterman CMPatterson GHUpadhyaya ATaraska JWShroff H
Nat Methods
2018 Jun


Zhu GLynn GMJacobson OChen KLiu YZhang HMa YZhang FTian RNi QCheng SWang ZLu NYung BCWang ZLang LFu XJin AWeiss IDVishwasrao HNiu GShroff HKlinman DMSeder RAChen X
Nat Commun
2017 Dec 05

Zhu GMei LVishwasrao HDJacobson OWang ZLiu YYung BCFu XJin ANiu GWang QZhang FShroff HChen X
Nat Commun
2017 Nov 14

Wu YKumar ASmith CArdiel EChandris PChristensen RRey-Suarez IGuo MVishwasrao HDChen JTang JUpadhyaya ALa Riviere PJShroff H
Nat Commun
2017 Nov 13

Qian ZZhurkin VBAdhya S
Proc Natl Acad Sci U S A
2017 Nov 14

Kieffer-Kwon KRNimura KRao SSPXu JJung SPekowska ADose MStevens EMathe EDong PHuang SCRicci MABaranello LZheng YTomassoni Ardori FResch WStavreva DNelson SMcAndrew MCasellas AFinn EGregory CSt Hilaire BGJohnson SMDubois WCosma MPBatchelor ELevens DPhair RDMisteli TTessarollo LHager GLakadamyali MLiu ZFloer MShroff HAiden ELCasellas R
Mol Cell
2017 Aug 17

Sardo LLin AKhakhina SBeckman LRicon LElbezanti WJaison TVishwasrao HShroff HJanetopoulos CKlase ZA
J Cell Sci
2017 Sep 01

Normanno DBoudarène LDugast-Darzacq CChen JRichter CProux FBénichou OVoituriez RDarzacq XDahan M
Nat Commun
2015 Jul 07

Grimm JBEnglish BPChen JSlaughter JPZhang ZRevyakin APatel RMacklin JJNormanno DSinger RHLionnet TLavis LD
Nat Methods
2015 Mar

Hajj BWisniewski JEl Beheiry MChen JRevyakin AWu CDahan M
Proc Natl Acad Sci U S A
2014 Dec 09


Chen JZhang ZLi LChen BCRevyakin AHajj BLegant WDahan MLionnet TBetzig ETjian RLiu Z
Cell
2014 Mar 13